Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0415 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1332740 bp
Thymine Count
1329596 bp
Guanine Count
1339866 bp
Cytosine Count
1342292 bp
Genome Length
5353714 bp
Protein-coding Genes
4873 genes
Non-Coding Genes
405 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion apparatus protein orga/mxik | C9190_09765 | Not Available | Negative | 2105735 - 2106316 | 22661.7 |
| escj/yscj/hrcj family type iii secretion inner membrane ring protein | C9190_09770 | Not Available | Negative | 2106332 - 2107066 | 27625.7 |
| hypothetical protein | C9190_09775 | Not Available | Negative | 2107063 - 2107395 | 12216.5 |
| type iii secretion system needle complex protein | C9190_09780 | Not Available | Negative | 2107415 - 2107654 | 9038.44 |
| enterotoxin | C9190_09785 | Not Available | Negative | 2107668 - 2108417 | 29013.4 |
| type iii secretion protein | C9190_09790 | Not Available | Negative | 2108411 - 2108755 | 12572.4 |
| transcriptional regulator | C9190_09795 | Not Available | Positive | 2109106 - 2109606 | 19159.0 |
| invasion protein | C9190_09800 | Not Available | Positive | 2109636 - 2109902 | 10142.1 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | C9190_09805 | Not Available | Negative | 2109963 - 2111084 | 43345.2 |
| escs/yscs/hrcs family type iii secretion system export apparatus protein | C9190_09815 | Not Available | Negative | 2111862 - 2112122 | 9430.85 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





