Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0413 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1308793 bp
Thymine Count
1315415 bp
Guanine Count
1337976 bp
Cytosine Count
1316550 bp
Genome Length
5287384 bp
Protein-coding Genes
4804 genes
Non-Coding Genes
382 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin ccdb | C9188_25880 | Not Available | Negative | 5093169 - 5093474 | 11707.2 |
| antitoxin ccda | C9188_25885 | Not Available | Negative | 5093476 - 5093694 | 8372.8 |
| dna-binding protein | C9188_25890 | Not Available | Positive | 5094153 - 5094836 | 25235.2 |
| hypothetical protein | C9188_25895 | Not Available | Positive | 5094833 - 5095453 | 23740.7 |
| hypothetical protein | C9188_25900 | Not Available | Positive | 5095450 - 5095650 | 7619.05 |
| hypothetical protein | C9188_25905 | Not Available | Negative | 5095557 - 5095778 | 8479.37 |
| repb family plasmid replication initiator protein | C9188_25910 | Not Available | Positive | 5096058 - 5097035 | 37238.0 |
| site-specific integrase | C9188_25915 | Not Available | Negative | 5097320 - 5098060 | 28225.5 |
| serine/threonine protein kinase | C9188_25920 | Not Available | Negative | 5098181 - 5098411 | 8978.82 |
| hypothetical protein | C9188_25925 | Not Available | Positive | 5098382 - 5098579 | 7826.66 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





