Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0413 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1308793 bp
Thymine Count
1315415 bp
Guanine Count
1337976 bp
Cytosine Count
1316550 bp
Genome Length
5287384 bp
Protein-coding Genes
4804 genes
Non-Coding Genes
382 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | C9188_25730 | Not Available | Positive | 5075579 - 5076288 | 26371.5 |
| head-tail adaptor protein | C9188_25735 | Not Available | Positive | 5076355 - 5076705 | 12663.4 |
| hk97 gp10 family phage protein | C9188_25740 | Not Available | Positive | 5076702 - 5077148 | 16656.9 |
| duf3168 domain-containing protein | C9188_25745 | Not Available | Positive | 5077145 - 5077487 | 12414.8 |
| ail/lom family protein | C9188_25750 | Not Available | Negative | 5077488 - 5077949 | 17032.7 |
| hypothetical protein | C9188_25755 | Not Available | Negative | 5078020 - 5078660 | 22146.2 |
| phage tail protein | C9188_25760 | Not Available | Negative | 5078661 - 5079402 | 28225.2 |
| phage minor tail protein l | C9188_25765 | Not Available | Negative | 5079408 - 5079824 | 15098.7 |
| nird/ygiw/ydei family stress tolerance protein | C9188_25770 | Not Available | Positive | 5079825 - 5080027 | 7335.58 |
| hypothetical protein | C9188_25775 | Not Available | Positive | 5080149 - 5080421 | 10888.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





