Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0413 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1308793 bp
Thymine Count
1315415 bp
Guanine Count
1337976 bp
Cytosine Count
1316550 bp
Genome Length
5287384 bp
Protein-coding Genes
4804 genes
Non-Coding Genes
382 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 5071048 - 5071124 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 5071138 - 5071214 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 5071222 - 5071297 | Not Available |
| antiterminator | C9188_25690 | Not Available | Negative | 5071355 - 5071477 | 4267.22 |
| antiterminator | C9188_25695 | Not Available | Negative | 5071508 - 5072197 | 26486.9 |
| host specificity protein j | C9188_25700 | Not Available | Negative | 5072284 - 5072656 | 13008.5 |
| tail assembly protein | C9188_25705 | Not Available | Negative | 5072998 - 5073630 | 22155.8 |
| duf1076 domain-containing protein | C9188_25710 | Not Available | Positive | 5073737 - 5074312 | 20504.4 |
| duf1076 domain-containing protein | C9188_25715 | Not Available | Positive | 5074385 - 5074984 | 22151.4 |
| trmb family transcriptional regulator | C9188_25725 | Not Available | Positive | 5075246 - 5075443 | 7386.94 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





