Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0413 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1308793 bp
Thymine Count
1315415 bp
Guanine Count
1337976 bp
Cytosine Count
1316550 bp
Genome Length
5287384 bp
Protein-coding Genes
4804 genes
Non-Coding Genes
382 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | C9188_24810 | Not Available | Negative | 4961830 - 4962132 | 10848.9 |
| hypothetical protein | C9188_24815 | Not Available | Positive | 4962230 - 4962601 | 14259.1 |
| stability determinant | C9188_24820 | Not Available | Positive | 4962622 - 4962813 | 7463.87 |
| type ii toxin-antitoxin system rele/pare family toxin | C9188_24825 | Not Available | Positive | 4962815 - 4963093 | 10661.8 |
| duf968 domain-containing protein | C9188_24870 | Not Available | Negative | 4969315 - 4970364 | 39384.5 |
| hypothetical protein | C9188_24875 | Not Available | Negative | 4970366 - 4970644 | 11225.1 |
| hypothetical protein | C9188_24880 | Not Available | Positive | 4970585 - 4970770 | 6767.37 |
| type i toxin-antitoxin system hok family toxin | C9188_24885 | Not Available | Negative | 4970812 - 4971024 | 7932.0 |
| hypothetical protein | C9188_24890 | Not Available | Negative | 4971211 - 4971315 | 3628.62 |
| hypothetical protein | C9188_24895 | Not Available | Negative | 4971425 - 4971988 | 20985.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





