Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0413 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1308793 bp
Thymine Count
1315415 bp
Guanine Count
1337976 bp
Cytosine Count
1316550 bp
Genome Length
5287384 bp
Protein-coding Genes
4804 genes
Non-Coding Genes
382 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| manganese catalase family protein | C9188_24645 | Not Available | Negative | 4940774 - 4941664 | 32169.9 |
| ferritin-like domain-containing protein | C9188_24650 | Not Available | Negative | 4941683 - 4942189 | 19064.6 |
| ferritin-like domain-containing protein | C9188_24655 | Not Available | Negative | 4942226 - 4942726 | 18473.8 |
| stress-induced acidophilic repeat motif-containing protein | C9188_24660 | Not Available | Negative | 4942805 - 4942987 | 6167.86 |
| class i sam-dependent methyltransferase | C9188_24670 | Not Available | Negative | 4943485 - 4944153 | 24518.5 |
| tail fiber assembly protein | C9188_24675 | Not Available | Positive | 4944210 - 4944458 | 9601.26 |
| is66 family insertion sequence hypothetical protein | C9188_24680 | Not Available | Positive | 4944513 - 4944577 | 2290.85 |
| sugar phosphate isomerase/epimerase | C9188_24685 | Not Available | Negative | 4944578 - 4944665 | 3068.74 |
| effector protein nlef | C9188_24695 | Not Available | Negative | 4945584 - 4946153 | 21389.2 |
| t3ss effector protein nleh | C9188_24700 | Not Available | Negative | 4946219 - 4947130 | 33684.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





