Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0413 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1308793 bp
Thymine Count
1315415 bp
Guanine Count
1337976 bp
Cytosine Count
1316550 bp
Genome Length
5287384 bp
Protein-coding Genes
4804 genes
Non-Coding Genes
382 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | C9188_24595 | Not Available | Positive | 4934747 - 4935148 | 15302.5 |
| antitoxin | C9188_24600 | Not Available | Positive | 4935176 - 4935367 | 7026.17 |
| type ii toxin-antitoxin system rele/pare family toxin | C9188_24605 | Not Available | Positive | 4935367 - 4935654 | 10979.5 |
| hypothetical protein | C9188_24610 | Not Available | Positive | 4935656 - 4935874 | 8130.42 |
| duf1391 domain-containing protein | C9188_24615 | Not Available | Positive | 4935932 - 4936087 | 5792.67 |
| hypothetical protein | C9188_24620 | Not Available | Positive | 4936229 - 4936618 | 15160.1 |
| hypothetical protein | C9188_24625 | Not Available | Negative | 4936805 - 4936990 | 6885.18 |
| hypothetical protein | C9188_24630 | Not Available | Negative | 4936992 - 4937297 | 11084.6 |
| hypothetical protein | C9188_24635 | Not Available | Positive | 4937327 - 4940073 | 89994.6 |
| tail fiber assembly protein | C9188_24640 | Not Available | Positive | 4940073 - 4940654 | 21561.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





