Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0413 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1308793 bp
Thymine Count
1315415 bp
Guanine Count
1337976 bp
Cytosine Count
1316550 bp
Genome Length
5287384 bp
Protein-coding Genes
4804 genes
Non-Coding Genes
382 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase family protein | C9188_24085 | Not Available | Positive | 4865843 - 4866715 | 32499.8 |
| hypothetical protein | C9188_24090 | Not Available | Positive | 4866885 - 4867076 | 6872.07 |
| autotransporter adhesin ag43 | C9188_24095 | Not Available | Positive | 4867087 - 4869936 | 97821.0 |
| dgtpase | C9188_24100 | Not Available | Positive | 4870047 - 4871813 | 66096.5 |
| is66 family insertion sequence hypothetical protein | C9188_24110 | Not Available | Positive | 4871975 - 4872649 | 25602.9 |
| is66 family insertion sequence hypothetical protein | C9188_24115 | Not Available | Positive | 4872646 - 4872993 | 13043.2 |
| ail/lom family protein | C9188_24130 | Not Available | Negative | 4875315 - 4875863 | 20384.5 |
| hypothetical protein | C9188_24150 | Not Available | Negative | 4878568 - 4878762 | 7755.58 |
| shet2/espl2 family type iii secretion system effector toxin | C9188_24155 | Not Available | Positive | 4878843 - 4880492 | 62159.2 |
| type iii secretion system effector arginine glycosyltransferase nleb | C9188_24165 | Not Available | Positive | 4881100 - 4882089 | 37644.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





