Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | C9183_19135 | Not Available | Positive | 3881231 - 3881929 | 24355.4 |
| vitamin b12 abc transporter substrate-binding protein btuf | C9183_19140 | Not Available | Positive | 3881922 - 3882722 | 29383.4 |
| tric cation channel family protein | C9183_19145 | Not Available | Positive | 3882760 - 3883383 | 22129.1 |
| iron-sulfur cluster insertion protein erpa | C9183_19150 | Not Available | Negative | 3883430 - 3883774 | 12101.2 |
| hypothetical protein | C9183_19155 | Not Available | Negative | 3883767 - 3883832 | 2329.94 |
| h(+)/cl(-) exchange transporter clca | C9183_19160 | Not Available | Negative | 3883856 - 3885277 | 50351.9 |
| glutamate-1-semialdehyde 2,1-aminomutase | C9183_19165 | Not Available | Positive | 3885502 - 3886782 | 45328.7 |
| fe(3+)-hydroxamate abc transporter permease fhub | C9183_19170 | Not Available | Negative | 3886817 - 3888799 | 70468.7 |
| fe(3+)-hydroxamate abc transporter substrate-binding protein fhud | C9183_19175 | Not Available | Negative | 3888796 - 3889686 | 33016.3 |
| iron(3+)-hydroxamate import atp-binding protein fhuc | C9183_19180 | Not Available | Negative | 3889686 - 3890483 | 28872.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





