Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ghot/ortt family toxin | C9183_18450 | Not Available | Negative | 3732067 - 3732240 | 6555.44 |
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | C9183_18455 | Not Available | Negative | 3732268 - 3732564 | 11468.6 |
| n-acetyltransferase | C9183_18460 | Not Available | Negative | 3732791 - 3733063 | 10469.6 |
| 4fe-4s mono-cluster protein yjdi | C9183_18465 | Not Available | Negative | 3733075 - 3733305 | 8622.41 |
| two-component system sensor histidine kinase dcus | C9183_18470 | Not Available | Positive | 3733486 - 3735117 | 60553.4 |
| two-component system response regulator dcur | C9183_18475 | Not Available | Positive | 3735114 - 3735833 | 27508.0 |
| anaerobic c4-dicarboxylate transporter dcub | C9183_18480 | Not Available | Positive | 3736404 - 3737744 | 47938.2 |
| class i fumarate hydratase | C9183_18485 | Not Available | Positive | 3737822 - 3739468 | 60077.7 |
| duf2238 domain-containing protein | C9183_18490 | Not Available | Positive | 3739591 - 3740220 | 23358.3 |
| hypothetical protein | C9183_18495 | Not Available | Positive | 3740225 - 3740404 | 6324.69 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





