Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar efflux transporter | C9183_18185 | Not Available | Negative | 3667695 - 3668885 | 42540.8 |
| putative protein ynek | C9183_18190 | Not Available | Negative | 3669035 - 3670150 | 42828.5 |
| lysr family transcriptional regulator | C9183_18195 | Not Available | Negative | 3670228 - 3671109 | 32423.8 |
| succinate-semialdehyde dehydrogenase | C9183_18200 | Not Available | Positive | 3671210 - 3672598 | 49647.6 |
| glutaminase 2 | C9183_18205 | Not Available | Positive | 3672662 - 3673588 | 33517.6 |
| duf4186 domain-containing protein | C9183_18210 | Not Available | Positive | 3673588 - 3673947 | 13544.5 |
| diguanylate cyclase | C9183_18215 | Not Available | Positive | 3674086 - 3675504 | 52183.5 |
| tagaturonate reductase | C9183_18220 | Not Available | Positive | 3675731 - 3677182 | 54825.4 |
| trans-aconitate 2-methyltransferase | C9183_18230 | Not Available | Negative | 3678307 - 3679065 | 29044.5 |
| autoinducer 2-degrading protein lsrg | C9183_18235 | Not Available | Negative | 3679122 - 3679412 | 11269.4 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





