Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative selenium delivery protein ydfz | C9183_18085 | Not Available | Negative | 3650246 - 3650449 | 7276.83 |
| transcriptional regulator | C9183_18090 | Not Available | Negative | 3650627 - 3651313 | 26566.7 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | C9183_18095 | Not Available | Negative | 3651402 - 3652148 | 27250.5 |
| peptidyl-dipeptidase dcp | C9183_18100 | Not Available | Positive | 3652285 - 3654330 | 77503.8 |
| 2-oxo-tetronate isomerase | C9183_18105 | Not Available | Negative | 3654375 - 3654893 | 18211.7 |
| ydei family stress tolerance ob fold protein | C9183_18110 | Not Available | Positive | 3655169 - 3655561 | 14107.8 |
| diguanylate cyclase | C9183_18115 | Not Available | Positive | 3655816 - 3656706 | 33841.4 |
| protein mgts | C9183_18120 | Not Available | Negative | 3656925 - 3657020 | 3509.36 |
| efflux mfs transporter ydee | C9183_18125 | Not Available | Negative | 3657147 - 3658334 | 42611.5 |
| o-acetylserine/cysteine exporter | C9183_18130 | Not Available | Positive | 3658528 - 3659427 | 32397.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





