Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| escr/yscr/hrcr family type iii secretion system export apparatus protein | C9183_18025 | Not Available | Negative | 3640012 - 3640677 | 24526.4 |
| yscq/hrcq family type iii secretion apparatus protein | C9183_18030 | Not Available | Negative | 3640667 - 3641239 | 21966.1 |
| hypothetical protein | C9183_18035 | Not Available | Negative | 3641249 - 3641614 | 13693.6 |
| tail fiber protein | C9183_18045 | Not Available | Positive | 3642729 - 3644777 | 72494.2 |
| tail fiber assembly protein | C9183_18050 | Not Available | Positive | 3644777 - 3645352 | 21270.9 |
| recombinase family protein | C9183_18055 | Not Available | Negative | 3645450 - 3646040 | 21821.5 |
| cold shock protein ydfk | C9183_18060 | Not Available | Negative | 3646359 - 3646592 | 8778.82 |
| hypothetical protein | C9183_18065 | Not Available | Negative | 3646661 - 3646774 | 4013.06 |
| mfs transporter | C9183_18075 | Not Available | Positive | 3647378 - 3648661 | 46296.0 |
| mannitol dehydrogenase family protein | C9183_18080 | Not Available | Positive | 3648750 - 3650210 | 53636.2 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





