Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| primosomal protein n' | C9183_17120 | Not Available | Negative | 3486197 - 3488395 | 81652.7 |
| 50s ribosomal protein l31 | C9183_17125 | Not Available | Positive | 3488598 - 3488810 | 7871.49 |
| type iv secretion protein rhs | C9183_17130 | Not Available | Positive | 3488970 - 3489047 | 2554.02 |
| hypothetical protein | C9183_17140 | Not Available | Positive | 3489408 - 3490079 | 24924.9 |
| pilus assembly protein pilm | C9183_17145 | Not Available | Positive | 3490080 - 3490514 | 16269.7 |
| piln family type ivb pilus formation outer membrane protein | C9183_17150 | Not Available | Positive | 3490764 - 3492365 | 57306.2 |
| pilus assembly protein | C9183_17155 | Not Available | Positive | 3492389 - 3493684 | 48376.3 |
| hypothetical protein | C9183_17165 | Not Available | Positive | 3493843 - 3494379 | 20162.5 |
| hypothetical protein | C9183_17170 | Not Available | Positive | 3494515 - 3495111 | 22816.9 |
| type iv pilus biogenesis protein pilp | C9183_17175 | Not Available | Positive | 3495282 - 3495743 | 16491.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





