Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| der gtpase-activating protein yihi | C9183_16770 | Not Available | Positive | 3414988 - 3415497 | 19060.3 |
| coproporphyrinogen iii oxidase | C9183_16775 | Not Available | Positive | 3415686 - 3417059 | 52732.0 |
| hypothetical protein | C9183_16780 | Not Available | Negative | 3417249 - 3417359 | 3618.45 |
| nitrogen regulation protein nr(i) | C9183_16785 | Not Available | Negative | 3417471 - 3418880 | 52257.9 |
| nitrogen regulation protein nr(ii) | C9183_16790 | Not Available | Negative | 3418892 - 3419941 | 38558.5 |
| glutamate--ammonia ligase | C9183_16795 | Not Available | Negative | 3420114 - 3421499 | 51037.6 |
| translational gtpase typa | C9183_16800 | Not Available | Positive | 3421896 - 3423719 | 67359.5 |
| utra domain-containing protein | C9183_16805 | Not Available | Positive | 3423936 - 3424646 | 26898.2 |
| hypothetical protein | C9183_16810 | Not Available | Positive | 3424654 - 3425634 | 36943.9 |
| mfs transporter | C9183_16815 | Not Available | Positive | 3425736 - 3427001 | 46382.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





