Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl synthase | C9183_16620 | Not Available | Negative | 3384595 - 3385560 | 36073.8 |
| dna-binding transcriptional regulator | C9183_16625 | Not Available | Negative | 3385769 - 3386722 | 35950.4 |
| octanoyltransferase | C9183_16630 | Not Available | Negative | 3386981 - 3387622 | 23884.0 |
| duf493 family protein | C9183_16635 | Not Available | Negative | 3387723 - 3387986 | 9827.92 |
| d-alanyl-d-alanine carboxypeptidase | C9183_16640 | Not Available | Negative | 3388097 - 3389308 | 44446.5 |
| endolytic peptidoglycan transglycosylase rlpa | C9183_16645 | Not Available | Negative | 3389447 - 3390535 | 37514.1 |
| rod shape-determining protein roda | C9183_16650 | Not Available | Negative | 3390546 - 3391658 | 40478.6 |
| penicillin-binding protein 2 | C9183_16655 | Not Available | Negative | 3391661 - 3393562 | 70860.6 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | C9183_16660 | Not Available | Negative | 3393593 - 3394060 | 17372.1 |
| ribosome silencing factor | C9183_16665 | Not Available | Negative | 3394064 - 3394381 | 11582.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





