Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna damage-inducible protein d | C9183_14995 | Not Available | Positive | 3046082 - 3046906 | 31163.7 |
| trimeric intracellular cation channel family protein | C9183_15000 | Not Available | Positive | 3047198 - 3047815 | 22049.8 |
| nad-dependent dna ligase ligb | C9183_15005 | Not Available | Negative | 3047812 - 3049494 | 63338.0 |
| guanylate kinase | C9183_15010 | Not Available | Positive | 3049752 - 3050375 | 23594.1 |
| dna-directed rna polymerase subunit omega | C9183_15015 | Not Available | Positive | 3050430 - 3050705 | 10237.2 |
| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase | C9183_15020 | Not Available | Positive | 3050724 - 3052832 | 79313.1 |
| trna (guanosine(18)-2'-o)-methyltransferase trmh | C9183_15025 | Not Available | Positive | 3052839 - 3053528 | 25344.6 |
| atp-dependent dna helicase recg | C9183_15030 | Not Available | Positive | 3053534 - 3055615 | 76512.2 |
| hypothetical protein | C9183_15035 | Not Available | Negative | 3055600 - 3056466 | 33171.7 |
| sodium/glutamate symport carrier protein | C9183_15040 | Not Available | Negative | 3056469 - 3057674 | 42445.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





