Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | C9183_14230 | Not Available | Positive | 2897716 - 2898711 | 36286.7 |
| abc transporter atp-binding protein | C9183_14235 | Not Available | Positive | 2898704 - 2900440 | 63177.4 |
| inner membrane transport permease ybhs | C9183_14240 | Not Available | Positive | 2900433 - 2901566 | 42062.4 |
| inner membrane transport permease ybhr | C9183_14245 | Not Available | Positive | 2901577 - 2902683 | 41568.2 |
| hypothetical protein | C9183_14250 | Not Available | Negative | 2902645 - 2903055 | 15465.6 |
| endonuclease/exonuclease/phosphatase family protein | C9183_14255 | Not Available | Positive | 2903188 - 2903949 | 28819.5 |
| cardiolipin synthase clsb | C9183_14260 | Not Available | Positive | 2903946 - 2905187 | 47636.2 |
| upf0104 family protein | C9183_14265 | Not Available | Positive | 2905187 - 2906143 | 35848.5 |
| bax inhibitor-1/ycca family protein | C9183_14270 | Not Available | Negative | 2906179 - 2906892 | 26020.7 |
| bax inhibitor-1/ycca family protein | C9183_14275 | Not Available | Negative | 2907097 - 2907801 | 25903.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





