Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoethanolamine transferase | C9183_14125 | Not Available | Positive | 2875335 - 2876918 | 59732.4 |
| outer membrane protein x | C9183_14130 | Not Available | Negative | 2876967 - 2877482 | 18603.6 |
| hypothetical protein | C9183_14135 | Not Available | Negative | 2877535 - 2877600 | 2716.34 |
| threonine/homoserine exporter rhta | C9183_14140 | Not Available | Positive | 2877835 - 2878722 | 31184.4 |
| dna starvation/stationary phase protection protein | C9183_14145 | Not Available | Positive | 2879021 - 2879524 | 18696.3 |
| glutamine abc transporter substrate-binding protein glnh | C9183_14150 | Not Available | Positive | 2879928 - 2880674 | 27191.5 |
| glutamine abc transporter permease | C9183_14155 | Not Available | Positive | 2880813 - 2881472 | 24365.8 |
| glutamine abc transporter atp-binding protein glnq | C9183_14160 | Not Available | Positive | 2881469 - 2882191 | 26733.6 |
| moderate conductance mechanosensitive channel ybio | C9183_14165 | Not Available | Positive | 2882308 - 2884533 | 81864.4 |
| 23s rrna (adenine(1618)-n(6))-methyltransferase rlmf | C9183_14170 | Not Available | Negative | 2884530 - 2885537 | 37305.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





