Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9183_13925 | Not Available | Positive | 2836536 - 2836754 | 8011.78 |
| formate hydrogenlyase regulatory protein hyca | C9183_13930 | Not Available | Positive | 2836842 - 2837303 | 17627.9 |
| formate hydrogenlyase subunit 2 | C9183_13935 | Not Available | Positive | 2837428 - 2838039 | 21888.4 |
| formate hydrogenlyase subunit 3 | C9183_13940 | Not Available | Positive | 2838036 - 2839862 | 64145.2 |
| formate hydrogenlyase subunit 4 | C9183_13945 | Not Available | Positive | 2839865 - 2840788 | 33031.4 |
| formate hydrogenlyase subunit 5 | C9183_13950 | Not Available | Positive | 2840806 - 2842515 | 64970.1 |
| 4fe-4s dicluster domain-containing protein | C9183_13955 | Not Available | Positive | 2842525 - 2843067 | 20330.4 |
| nadh-quinone oxidoreductase subunit nuob | C9183_13960 | Not Available | Positive | 2843067 - 2843834 | 27999.7 |
| formate hydrogenlyase maturation protein hych | C9183_13965 | Not Available | Positive | 2843831 - 2844241 | 15465.5 |
| hydrogenase maturation peptidase hyci | C9183_13970 | Not Available | Positive | 2844234 - 2844704 | 17027.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





