Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated helicase/endonuclease cas3 | C9183_13720 | Not Available | Positive | 2797500 - 2800199 | 101945.0 |
| type i-e crispr-associated protein cse1/casa | C9183_13725 | Not Available | Positive | 2800297 - 2801859 | 59650.5 |
| type i-e crispr-associated protein cse2/casb | C9183_13730 | Not Available | Positive | 2801856 - 2802389 | 20664.7 |
| type i-e crispr-associated protein cas7/cse4/casc | C9183_13735 | Not Available | Positive | 2802404 - 2803477 | 39250.7 |
| type i-e crispr-associated protein cas5/casd | C9183_13740 | Not Available | Positive | 2803488 - 2804234 | 28603.1 |
| type i-e crispr-associated protein cas6/cse3/case | C9183_13745 | Not Available | Positive | 2804216 - 2804866 | 24680.5 |
| type i-e crispr-associated endonuclease cas1 | C9183_13750 | Not Available | Positive | 2804863 - 2805783 | 33414.7 |
| type i-e crispr-associated endoribonuclease cas2 | C9183_13755 | Not Available | Positive | 2805783 - 2806076 | 11004.4 |
| aminopeptidase | C9183_13760 | Not Available | Negative | 2806772 - 2807809 | 37914.3 |
| sulfate adenylyltransferase subunit 2 | C9183_13765 | Not Available | Positive | 2808061 - 2808969 | 35205.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





