Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactaldehyde reductase | C9183_13515 | Not Available | Positive | 2751698 - 2752846 | 40515.7 |
| flap endonuclease xni | C9183_13520 | Not Available | Negative | 2752901 - 2753656 | 28167.7 |
| l-serine ammonia-lyase | C9183_13525 | Not Available | Negative | 2753768 - 2755135 | 48724.8 |
| serine transporter | C9183_13530 | Not Available | Negative | 2755193 - 2756482 | 46909.2 |
| log family protein ygdh | C9183_13535 | Not Available | Negative | 2757039 - 2758403 | 50975.0 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | C9183_13540 | Not Available | Negative | 2758515 - 2759363 | 32558.1 |
| protein syd | C9183_13545 | Not Available | Positive | 2759431 - 2759976 | 20709.6 |
| yqcc family protein | C9183_13550 | Not Available | Positive | 2760598 - 2760927 | 12787.2 |
| trna pseudouridine(65) synthase truc | C9183_13555 | Not Available | Positive | 2760927 - 2761709 | 29657.4 |
| flavodoxin | C9183_13560 | Not Available | Positive | 2761727 - 2762176 | 16275.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





