Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein hfq | C9183_13355 | Not Available | Negative | 2722211 - 2722519 | 11167.0 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | C9183_13360 | Not Available | Negative | 2722605 - 2723555 | 35067.1 |
| dna mismatch repair endonuclease mutl | C9183_13365 | Not Available | Negative | 2723548 - 2725395 | 67880.5 |
| n-acetylmuramoyl-l-alanine amidase amib | C9183_13370 | Not Available | Negative | 2725405 - 2726742 | 47959.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | C9183_13375 | Not Available | Negative | 2726761 - 2727222 | 16854.0 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | C9183_13380 | Not Available | Negative | 2727194 - 2728741 | 54516.2 |
| trna epoxyqueuosine(34) reductase queg | C9183_13385 | Not Available | Positive | 2728740 - 2729879 | 43057.3 |
| hypothetical protein | C9183_13390 | Not Available | Negative | 2729862 - 2729915 | 2056.38 |
| Trna-gly | Not Available | Not Available | Positive | 2730149 - 2730224 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 2730261 - 2730336 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





