Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytfj family protein | C9183_13100 | Not Available | Positive | 2676405 - 2676962 | 20617.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | C9183_13105 | Not Available | Negative | 2676952 - 2677692 | 27133.3 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | C9183_13110 | Not Available | Positive | 2677882 - 2679825 | 70896.0 |
| transcriptional regulator | C9183_13115 | Not Available | Negative | 2679954 - 2680334 | 14076.0 |
| sdr family oxidoreductase | C9183_13120 | Not Available | Positive | 2680423 - 2681283 | 29778.2 |
| dmt family transporter | C9183_13125 | Not Available | Positive | 2681391 - 2682356 | 35275.6 |
| iron-sulfur cluster repair protein ytfe | C9183_13130 | Not Available | Positive | 2682464 - 2683126 | 24912.1 |
| d-serine/d-alanine/glycine transporter | C9183_13135 | Not Available | Negative | 2683171 - 2684583 | 51662.6 |
| peptidylprolyl isomerase | C9183_13140 | Not Available | Negative | 2684892 - 2685512 | 22217.5 |
| peptidylprolyl isomerase | C9183_13145 | Not Available | Negative | 2685526 - 2685672 | 5494.88 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





