Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anaerobic ribonucleoside-triphosphate reductase | C9183_13000 | Not Available | Positive | 2652999 - 2655137 | 80027.0 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | C9183_13005 | Not Available | Positive | 2655295 - 2655759 | 17450.9 |
| soluble cytochrome b562 | C9183_13010 | Not Available | Negative | 2655804 - 2656190 | 14061.7 |
| metalloprotease pmba | C9183_13015 | Not Available | Negative | 2656373 - 2657725 | 48372.4 |
| ribosome-associated protein | C9183_13020 | Not Available | Positive | 2657819 - 2658370 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | C9183_13025 | Not Available | Negative | 2658526 - 2659899 | 49912.1 |
| fructose 1,6-bisphosphatase | C9183_13030 | Not Available | Positive | 2660075 - 2661073 | 36836.0 |
| sugar abc transporter permease yjff | C9183_13035 | Not Available | Negative | 2661106 - 2662101 | 35013.9 |
| abc transporter permease | C9183_13040 | Not Available | Negative | 2662088 - 2663110 | 35466.0 |
| sugar abc transporter atp-binding protein | C9183_13045 | Not Available | Negative | 2663124 - 2664626 | 55352.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





