Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconokinase | C9183_12850 | Not Available | Negative | 2620847 - 2621410 | 21014.2 |
| l-idonate 5-dehydrogenase | C9183_12855 | Not Available | Positive | 2621627 - 2622658 | 37162.7 |
| gluconate 5-dehydrogenase | C9183_12860 | Not Available | Positive | 2622682 - 2623446 | 27564.3 |
| gnt-ii system l-idonate transporter | C9183_12865 | Not Available | Positive | 2623511 - 2624830 | 46044.2 |
| laci family dna-binding transcriptional regulator | C9183_12870 | Not Available | Positive | 2624897 - 2625895 | 37560.5 |
| duf853 domain-containing protein | C9183_12875 | Not Available | Positive | 2625973 - 2627475 | 54300.6 |
| lipopolysaccharide abc transporter permease lptg | C9183_12880 | Not Available | Negative | 2627594 - 2628676 | 39606.1 |
| lipopolysaccharide abc transporter permease lptf | C9183_12885 | Not Available | Negative | 2628676 - 2629776 | 40360.1 |
| cytosol aminopeptidase | C9183_12890 | Not Available | Positive | 2630043 - 2631554 | 54883.1 |
| dna polymerase iii subunit chi | C9183_12895 | Not Available | Positive | 2631649 - 2632131 | 18119.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





