Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs2 family permease | C9183_12645 | Not Available | Positive | 2586210 - 2587544 | 46984.6 |
| duf1198 domain-containing protein | C9183_12650 | Not Available | Positive | 2587597 - 2588049 | 17220.1 |
| purine ribonucleoside efflux pump nepi | C9183_12655 | Not Available | Positive | 2588260 - 2589450 | 41844.5 |
| hypothetical protein | C9183_12660 | Not Available | Negative | 2589491 - 2589784 | 11070.3 |
| lipoprotein 28 | C9183_12665 | Not Available | Positive | 2590006 - 2590824 | 29425.3 |
| dmt family transporter | C9183_12670 | Not Available | Negative | 2590828 - 2591751 | 33115.4 |
| sugar efflux transporter setb | C9183_12675 | Not Available | Negative | 2591862 - 2593046 | 43466.0 |
| cytoplasmic protein | C9183_12680 | Not Available | Negative | 2593428 - 2593574 | 5444.61 |
| duf4942 domain-containing protein | C9183_12685 | Not Available | Negative | 2593838 - 2594683 | 32663.3 |
| duf957 domain-containing protein | C9183_12690 | Not Available | Negative | 2594768 - 2594965 | 7418.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





