Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | C9183_12540 | Not Available | Positive | 2563587 - 2565248 | 58942.9 |
| gntr family transcriptional regulator | C9183_12545 | Not Available | Negative | 2565245 - 2565961 | 27357.6 |
| pts sugar transporter subunit iib | C9183_12550 | Not Available | Positive | 2566257 - 2567873 | 58321.1 |
| arac family transcriptional regulator | C9183_12560 | Not Available | Negative | 2568684 - 2569577 | 33959.8 |
| solute:sodium symporter family transporter | C9183_12565 | Not Available | Positive | 2569744 - 2571459 | 62130.8 |
| duf4976 domain-containing protein | C9183_12570 | Not Available | Positive | 2571456 - 2572949 | 57269.4 |
| hypothetical protein | C9183_12575 | Not Available | Negative | 2572996 - 2573445 | 15730.8 |
| duf202 domain-containing protein | C9183_12580 | Not Available | Positive | 2573556 - 2573903 | 12780.1 |
| duf202 domain-containing protein | C9183_12585 | Not Available | Positive | 2573893 - 2574255 | 13769.1 |
| radical sam protein | C9183_12590 | Not Available | Positive | 2574252 - 2574749 | 19226.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





