Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate reductase | C9183_12390 | Not Available | Negative | 2534641 - 2535207 | 20376.8 |
| hypothetical protein | C9183_12395 | Not Available | Negative | 2535229 - 2535978 | 27682.2 |
| transcriptional regulator | C9183_12400 | Not Available | Negative | 2536135 - 2537094 | 36930.9 |
| multidrug efflux mfs transporter mdtl | C9183_12405 | Not Available | Negative | 2537069 - 2538244 | 41552.2 |
| low affinity tryptophan permease tnab | C9183_12410 | Not Available | Negative | 2538376 - 2539578 | 43526.2 |
| tryptophanase | C9183_12415 | Not Available | Negative | 2539714 - 2541129 | 52776.4 |
| tryptophanase leader peptide | C9183_12420 | Not Available | Negative | 2541350 - 2541424 | 2894.56 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C9183_12425 | Not Available | Negative | 2541667 - 2543031 | 49233.8 |
| membrane protein insertase yidc | C9183_12430 | Not Available | Negative | 2543137 - 2544783 | 61543.5 |
| membrane protein insertion efficiency factor yidd | C9183_12435 | Not Available | Negative | 2544786 - 2545043 | 9381.61 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





