Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator hcar | C9183_11885 | Not Available | Negative | 2424859 - 2425749 | 32812.2 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | C9183_11890 | Not Available | Positive | 2425885 - 2427246 | 51053.8 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | C9183_11895 | Not Available | Positive | 2427243 - 2427761 | 20580.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | C9183_11900 | Not Available | Positive | 2427761 - 2428081 | 11329.3 |
| 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | C9183_11905 | Not Available | Positive | 2428078 - 2428890 | 28471.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--nad+ reductase component | C9183_11910 | Not Available | Positive | 2428900 - 2430102 | 43966.8 |
| doxx family protein | C9183_11915 | Not Available | Positive | 2430199 - 2430621 | 15212.3 |
| aldose 1-epimerase | C9183_11920 | Not Available | Negative | 2430669 - 2431541 | 32817.2 |
| alcohol dehydrogenase | C9183_11925 | Not Available | Negative | 2431553 - 2432614 | 38080.1 |
| abc transporter permease | C9183_11930 | Not Available | Negative | 2432680 - 2433678 | 34448.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





