Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing gmp synthase | C9183_11735 | Not Available | Negative | 2388291 - 2389868 | 58668.5 |
| imp dehydrogenase | C9183_11740 | Not Available | Negative | 2389937 - 2391403 | 52025.6 |
| exodeoxyribonuclease vii large subunit | C9183_11745 | Not Available | Positive | 2391565 - 2392935 | 51863.4 |
| hypothetical protein | C9183_11750 | Not Available | Negative | 2392932 - 2393147 | 7959.67 |
| 50s ribosomal subunit stability factor | C9183_11755 | Not Available | Negative | 2393216 - 2394688 | 55039.1 |
| outer membrane protein assembly factor bamb | C9183_11760 | Not Available | Negative | 2394806 - 2395984 | 41829.5 |
| ancillary secyeg translocon subunit | C9183_11765 | Not Available | Negative | 2395995 - 2396615 | 22177.2 |
| histidine--trna ligase | C9183_11770 | Not Available | Negative | 2396633 - 2397907 | 47032.2 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | C9183_11775 | Not Available | Negative | 2398018 - 2399136 | 40686.1 |
| cytoskeleton protein rodz | C9183_11780 | Not Available | Negative | 2399163 - 2400176 | 36176.5 |
Pathways
304 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





