Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | C9183_11525 | Not Available | Negative | 2347157 - 2347342 | 7228.52 |
| hypothetical protein | C9183_11530 | Not Available | Negative | 2347342 - 2347401 | 2408.02 |
| arsc family reductase | C9183_11535 | Not Available | Positive | 2347782 - 2348138 | 13515.2 |
| succinyl-diaminopimelate desuccinylase | C9183_11540 | Not Available | Positive | 2348142 - 2349269 | 41271.4 |
| ypfn family protein | C9183_11545 | Not Available | Positive | 2349297 - 2349497 | 8071.78 |
| esterase | C9183_11550 | Not Available | Negative | 2349607 - 2350305 | 24801.4 |
| trna(met) cytidine acetyltransferase | C9183_11555 | Not Available | Negative | 2350379 - 2352394 | 74854.6 |
| neutral zinc metallopeptidase | C9183_11560 | Not Available | Negative | 2352409 - 2353272 | 31462.0 |
| trna(fmet)-specific endonuclease vapc | C9183_11565 | Not Available | Negative | 2353419 - 2353817 | 14895.2 |
| antitoxin | C9183_11570 | Not Available | Negative | 2353817 - 2354044 | 8499.05 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





