Escherichia coli strain FWSEC0408

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli strain FWSEC0408 is a Gram-negative, rod-shaped bacterium that exhibits a facultative anaerobic metabolism, enabling it to thrive in both aerobic and anaerobic environments. This strain is motile, possessing flagella, and typically arranges itself in pairs or as singles. It is considered mesophilic, with an optimal growth temperature of 37°C. FWSEC0408 is predominantly host-associated, having a diverse range of potential hosts including Homo sapiens, various mammals, birds, and even some plants like Solanum lycopersicum and Brassica oleracea var. italica. This broad host range indicates its ecological versatility and adaptability. The strain is known for its pathogenic effects in humans, contributing to a variety of health issues such as urinary tract infections (UTIs), gastrointestinal infections, neonatal meningitis, and foodborne illnesses. Other associated health concerns include severe conditions like hemolytic uremic syndrome (HUS), septicemia, and peritonitis, demonstrating its potential to cause significant morbidity. The presence of FWSEC0408 in diverse habitats and its pathogenicity highlight the ecological role of E. coli as both a commensal organism and a potential pathogen. This dual nature underscores the importance of monitoring such strains in clinical and environmental contexts to mitigate health risks associated with infections.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
Strainstrain FWSEC0408

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli strain FWSEC0408
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos taurus
Cell arrangementPairs - Singles
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Escherichia coli strain FWSEC0408 plasmid unnamed9

Gene Summary

Adenine Count

1321463 bp

Thymine Count

1320112 bp

Guanine Count

1354011 bp

Cytosine Count

1352387 bp

Genome Length

5357093 bp

Protein-coding Genes

4805 genes

Non-Coding Genes

456 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tonb system transport protein tonbC9183_08390Not AvailablePositive1716022 - 171674126063.6
acyl-coa thioester hydrolase yciaC9183_08395Not AvailableNegative1716781 - 171717914231.4
septation protein aC9183_08400Not AvailableNegative1717284 - 171782320791.3
upf0259 family proteinC9183_08405Not AvailableNegative1717853 - 171859626434.6
outer membrane protein ompwC9183_08415Not AvailablePositive1718953 - 171960623558.9
hypothetical proteinC9183_08680Not AvailableNegative1753031 - 175433546447.2
duf2620 domain-containing proteinC9183_08685Not AvailableNegative1754347 - 175470012463.4
phosphotriesterase family proteinC9183_08690Not AvailableNegative1754711 - 175558932889.3
phosphopentomutaseC9183_08695Not AvailableNegative1755586 - 175681244544.2
yhfx family plp-dependent enzymeC9183_08700Not AvailableNegative1756812 - 175797542386.8

Displaying genes 1891 – 1900 of 5261 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4785 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000173(R)-3-Hydroxybutyric acidC4H8O3Chemical structure of (R)-3-Hydroxybutyric acid625-72-3
Average104.0473Da
Monoisotopic104.047344122Da
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000238(R)-3-phenyllactateC9H9O3Chemical structure of (R)-3-phenyllactateNot available
Average165.169Da
Monoisotopic165.05571773Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da

Displaying 1–10 of 4785 metabolites

Health Effects

Health ConditionRelationReference
Gi diseaseCausesPMC11149725
UtisCausesPMC11434687
Colorectal cancerCausesPMC12198655
Pyogenic liver abscessesCausesPMC12392612
UtiCausesPMC13014981
ColibacillosisCausesPMC13255289
Enteric infectionsCausesPMC13255289
Foodborne infectionsCausesPMC13255289
Clinical mastitisCausesPMC13293316
DiarrheaCausesPMC3035056

Displaying health effects 1 – 10 of 103 in total