Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | C9183_07715 | Not Available | Negative | 1577559 - 1578368 | 29439.0 |
| multifunctional acyl-coa thioesterase i/protease i/lysophospholipase l1 | C9183_07720 | Not Available | Negative | 1578358 - 1578984 | 23651.5 |
| abc transporter atp-binding protein | C9183_07725 | Not Available | Positive | 1578952 - 1579638 | 24534.5 |
| abc transporter permease | C9183_07730 | Not Available | Positive | 1579635 - 1582049 | 89380.5 |
| hypothetical protein | C9183_07735 | Not Available | Positive | 1582479 - 1583748 | 46078.7 |
| spermidine/putrescine abc transporter permease potb | C9183_07845 | Not Available | Negative | 1605632 - 1606495 | 32384.4 |
| fe3+/spermidine/putrescine abc transporter atp-binding protein | C9183_07850 | Not Available | Negative | 1606479 - 1607615 | 43044.8 |
| peptidase t | C9183_07855 | Not Available | Positive | 1607865 - 1609094 | 44985.1 |
| 50s ribosomal protein l16 arginine hydroxylase | C9183_07860 | Not Available | Negative | 1609240 - 1610361 | 42567.2 |
| sensor protein phoq | C9183_07865 | Not Available | Negative | 1610437 - 1611897 | 55302.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





