Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0408 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1321463 bp
Thymine Count
1320112 bp
Guanine Count
1354011 bp
Cytosine Count
1352387 bp
Genome Length
5357093 bp
Protein-coding Genes
4805 genes
Non-Coding Genes
456 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | C9183_07255 | Not Available | Positive | 1482159 - 1483229 | 39419.0 |
| trna guanosine(34) transglycosylase tgt | C9183_07260 | Not Available | Positive | 1483285 - 1484412 | 42596.1 |
| preprotein translocase subunit yajc | C9183_07265 | Not Available | Positive | 1484435 - 1484767 | 11887.9 |
| protein translocase subunit secd | C9183_07270 | Not Available | Positive | 1484795 - 1486642 | 66636.3 |
| protein translocase subunit secf | C9183_07275 | Not Available | Positive | 1486653 - 1487624 | 35384.6 |
| hnh nuclease family protein | C9183_07280 | Not Available | Positive | 1487753 - 1488100 | 13364.7 |
| nucleoside-specific channel-forming protein tsx | C9183_07285 | Not Available | Negative | 1488277 - 1489161 | 33590.6 |
| duf3251 domain-containing protein | C9183_07290 | Not Available | Negative | 1489460 - 1489999 | 19633.6 |
| transcriptional regulator nrdr | C9183_07295 | Not Available | Positive | 1490150 - 1490599 | 17229.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | C9183_07300 | Not Available | Positive | 1490603 - 1491706 | 40345.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





