Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe2+-dependent dioxygenase | C9182_23920 | Not Available | Positive | 4832487 - 4833164 | 25557.2 |
| dksa/trar family c4-type zinc finger protein | C9182_23925 | Not Available | Positive | 4833238 - 4833504 | 9786.35 |
| duf1471 domain-containing protein | C9182_23930 | Not Available | Positive | 4833769 - 4834029 | 8568.2 |
| malate/lactate/ureidoglycolate dehydrogenase | C9182_23935 | Not Available | Negative | 4834258 - 4835343 | 38899.3 |
| dna-binding protein ybib | C9182_23940 | Not Available | Negative | 4835484 - 4836446 | 35050.7 |
| atp-dependent dna helicase ding | C9182_23945 | Not Available | Negative | 4836474 - 4838624 | 81425.9 |
| nadar family protein | C9182_23950 | Not Available | Positive | 4838744 - 4839226 | 18687.3 |
| inner membrane transport permease yhhj | C9182_23955 | Not Available | Negative | 4839669 - 4840793 | 41050.2 |
| abc transporter atp-binding protein/permease | C9182_23960 | Not Available | Negative | 4840793 - 4843528 | 100739.0 |
| hlyd family secretion protein | C9182_23965 | Not Available | Negative | 4843525 - 4844592 | 38844.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





