Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| shikimate dehydrogenase | C9182_23820 | Not Available | Positive | 4812165 - 4812983 | 29465.4 |
| duf1488 domain-containing protein | C9182_23825 | Not Available | Positive | 4812980 - 4813237 | 10007.5 |
| gamma carbonic anhydrase family protein | C9182_23830 | Not Available | Negative | 4813213 - 4813767 | 20246.3 |
| abc-f family atpase | C9182_23835 | Not Available | Negative | 4814296 - 4815888 | 59861.4 |
| transpeptidase | C9182_23840 | Not Available | Positive | 4816107 - 4817027 | 33327.2 |
| anion transporter | C9182_23845 | Not Available | Negative | 4817086 - 4818204 | 41153.2 |
| transcriptional regulator mntr | C9182_23850 | Not Available | Negative | 4818201 - 4818668 | 17641.3 |
| manganase accumulation protein mnts | C9182_23855 | Not Available | Positive | 4818854 - 4818982 | 5031.31 |
| phosphoethanolamine transferase opge | C9182_23860 | Not Available | Positive | 4819254 - 4820837 | 59709.4 |
| outer membrane protein x | C9182_23865 | Not Available | Negative | 4820886 - 4821401 | 18603.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





