Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xre family transcriptional regulator | C9182_23265 | Not Available | Positive | 4735490 - 4736026 | 19758.5 |
| u32 family peptidase | C9182_23270 | Not Available | Positive | 4736099 - 4738060 | 72890.2 |
| duf2554 family protein | C9182_23275 | Not Available | Negative | 4738152 - 4738382 | 8709.32 |
| mrna interferase hica | C9182_23280 | Not Available | Positive | 4738604 - 4738780 | 6782.3 |
| antitoxin hicb | C9182_23285 | Not Available | Positive | 4738826 - 4739242 | 15247.5 |
| plp-dependent aminotransferase family protein | C9182_23290 | Not Available | Positive | 4739321 - 4740727 | 52881.9 |
| extracellular solute-binding protein | C9182_23295 | Not Available | Positive | 4740972 - 4742117 | 42267.3 |
| abc transporter atp-binding protein | C9182_23300 | Not Available | Positive | 4742135 - 4743148 | 37044.9 |
| abc transporter permease | C9182_23305 | Not Available | Positive | 4743149 - 4744090 | 34381.2 |
| abc transporter permease | C9182_23310 | Not Available | Positive | 4744080 - 4744874 | 28739.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





