Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | C9182_23215 | Not Available | Negative | 4722674 - 4724176 | 55353.5 |
| abc transporter substrate-binding protein | C9182_23220 | Not Available | Negative | 4724486 - 4725442 | 34314.5 |
| inorganic pyrophosphatase | C9182_23225 | Not Available | Positive | 4725752 - 4726282 | 19732.6 |
| type ii toxin-antitoxin system chpb family toxin | C9182_23230 | Not Available | Negative | 4726362 - 4726712 | 12512.2 |
| antitoxin chps | C9182_23235 | Not Available | Negative | 4726706 - 4726957 | 9272.12 |
| gamma-glutamylcyclotransferase ytfp | C9182_23240 | Not Available | Negative | 4727169 - 4727510 | 12867.2 |
| autotransporter assembly complex protein tamb | C9182_23245 | Not Available | Negative | 4727513 - 4731292 | 136843.0 |
| autotransporter assembly complex protein tama | C9182_23250 | Not Available | Negative | 4731289 - 4733022 | 64799.7 |
| peptide-methionine (s)-s-oxide reductase msra | C9182_23255 | Not Available | Positive | 4733228 - 4733866 | 23316.3 |
| benzoate transporter bene | C9182_23260 | Not Available | Negative | 4734223 - 4735437 | 42159.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





