Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome maturation factor rimm | C9182_23065 | Not Available | Positive | 4690176 - 4690724 | 20606.6 |
| trna (guanosine(37)-n1)-methyltransferase trmd | C9182_23070 | Not Available | Positive | 4690755 - 4691522 | 28424.0 |
| 50s ribosomal protein l19 | C9182_23075 | Not Available | Positive | 4691564 - 4691911 | 13134.0 |
| ompa family protein | C9182_23080 | Not Available | Negative | 4691988 - 4692470 | 17259.6 |
| ggdef domain-containing protein | C9182_23085 | Not Available | Negative | 4692486 - 4693712 | 45992.2 |
| duf4154 domain-containing protein | C9182_23090 | Not Available | Negative | 4693702 - 4694220 | 18979.2 |
| duf2799 domain-containing protein | C9182_23095 | Not Available | Negative | 4694370 - 4694735 | 13204.3 |
| 3-deoxy-7-phosphoheptulonate synthase arof | C9182_23100 | Not Available | Positive | 4694945 - 4696015 | 38848.3 |
| bifunctional chorismate mutase/prephenate dehydrogenase | C9182_23105 | Not Available | Positive | 4696026 - 4697147 | 42049.0 |
| p-protein | C9182_23110 | Not Available | Negative | 4697190 - 4698350 | 43113.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





