Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase | C9182_22915 | Not Available | Negative | 4660805 - 4662700 | 70836.4 |
| sigma d regulator | C9182_22920 | Not Available | Negative | 4662933 - 4663409 | 18243.9 |
| nad(+) diphosphatase | C9182_22925 | Not Available | Positive | 4663504 - 4664277 | 29690.6 |
| uroporphyrinogen decarboxylase | C9182_22930 | Not Available | Positive | 4664317 - 4665381 | 39236.4 |
| deoxyribonuclease v | C9182_22935 | Not Available | Positive | 4665391 - 4666062 | 24673.9 |
| duf416 family protein | C9182_22940 | Not Available | Positive | 4666105 - 4666695 | 22613.9 |
| dna-binding protein hu-alpha | C9182_22945 | Not Available | Positive | 4666882 - 4667154 | 9535.51 |
| duf1481 domain-containing protein | C9182_22950 | Not Available | Positive | 4667167 - 4667862 | 26318.9 |
| zinc resistance-associated protein | C9182_22955 | Not Available | Negative | 4667864 - 4668289 | 15200.3 |
| two-component system sensor histidine kinase zras | C9182_22960 | Not Available | Positive | 4668527 - 4669903 | 50566.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





