Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c biogenesis atp-binding export protein ccma | C9182_22220 | Not Available | Positive | 4506359 - 4506982 | 23054.7 |
| heme exporter protein ccmb | C9182_22225 | Not Available | Positive | 4506979 - 4507641 | 23635.3 |
| heme exporter protein c | C9182_22230 | Not Available | Positive | 4507683 - 4508420 | 27886.9 |
| heme exporter protein d | C9182_22235 | Not Available | Positive | 4508417 - 4508626 | 7745.59 |
| cytochrome c-type biogenesis protein ccme | C9182_22240 | Not Available | Positive | 4508623 - 4509102 | 17699.4 |
| heme lyase ccmf/nrfe family subunit | C9182_22245 | Not Available | Positive | 4509099 - 4511042 | 71407.6 |
| thiol:disulfide interchange protein dsbe | C9182_22250 | Not Available | Positive | 4511039 - 4511596 | 20810.1 |
| cytochrome c-type biogenesis protein ccmh | C9182_22255 | Not Available | Positive | 4511593 - 4512645 | 39077.2 |
| nitrate/nitrite response regulator protein narp | C9182_22260 | Not Available | Negative | 4512680 - 4513327 | 23636.5 |
| peptidase | C9182_22270 | Not Available | Negative | 4514533 - 4514776 | 8914.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





