Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminopeptidase | C9182_21540 | Not Available | Negative | 4357001 - 4357786 | 29591.2 |
| Trna-asp | Not Available | Not Available | Positive | 4358113 - 4358189 | Not Available |
| dna polymerase iii subunit epsilon | C9182_21550 | Not Available | Negative | 4358322 - 4359053 | 27101.5 |
| ribonuclease hi | C9182_21555 | Not Available | Positive | 4359118 - 4359585 | 17570.9 |
| sam-dependent methyltransferase | C9182_21560 | Not Available | Negative | 4359582 - 4360304 | 27253.6 |
| hydroxyacylglutathione hydrolase | C9182_21565 | Not Available | Positive | 4360338 - 4361093 | 28451.9 |
| murein transglycosylase d | C9182_21570 | Not Available | Positive | 4361165 - 4362523 | 49420.3 |
| sam-dependent methyltransferase | C9182_21575 | Not Available | Negative | 4362571 - 4363341 | 28381.5 |
| endonuclease/exonuclease/phosphatase family protein | C9182_21580 | Not Available | Negative | 4363419 - 4364219 | 29993.4 |
| lysr family transcriptional regulator | C9182_21585 | Not Available | Positive | 4364460 - 4365374 | 33793.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





