Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation-efflux pump fief | C9182_20885 | Not Available | Negative | 4214602 - 4215504 | 32929.2 |
| periplasmic protein cpxp | C9182_20890 | Not Available | Negative | 4215653 - 4216153 | 18966.4 |
| envelope stress response regulator transcription factor cpxr | C9182_20895 | Not Available | Positive | 4216303 - 4217001 | 26313.7 |
| envelope stress sensor histidine kinase cpxa | C9182_20900 | Not Available | Positive | 4216998 - 4218371 | 51657.3 |
| 6-n-hydroxylaminopurine resistance protein | C9182_20905 | Not Available | Negative | 4218477 - 4219151 | 25344.1 |
| 2-keto-3-deoxygluconate permease | C9182_20910 | Not Available | Negative | 4219300 - 4220283 | 33671.4 |
| superoxide dismutase | C9182_20915 | Not Available | Negative | 4220543 - 4221163 | 23096.2 |
| l-rhamnose/proton symporter rhat | C9182_20920 | Not Available | Positive | 4221448 - 4222482 | 37281.1 |
| hth-type transcriptional activator rhar | C9182_20925 | Not Available | Negative | 4222479 - 4223417 | 35628.3 |
| transcriptional activator rhas | C9182_20930 | Not Available | Negative | 4223401 - 4224237 | 32331.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





