Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nark family nitrate/nitrite mfs transporter | C9182_20735 | Not Available | Negative | 4185575 - 4186966 | 49677.2 |
| nitrate/nitrite two-component system sensor histidine kinase narx | C9182_20740 | Not Available | Positive | 4187305 - 4189101 | 67059.9 |
| two-component system response regulator narl | C9182_20745 | Not Available | Positive | 4189094 - 4189744 | 23928.3 |
| inverse autotransporter invasin ycho | C9182_20750 | Not Available | Negative | 4189745 - 4191139 | 52188.7 |
| dsre/f sulfur relay family protein ychn | C9182_20755 | Not Available | Positive | 4191324 - 4191677 | 12693.5 |
| gamma-glutamylcyclotransferase | C9182_20760 | Not Available | Negative | 4191721 - 4192416 | 25585.8 |
| putative cation transport regulator chab | C9182_20765 | Not Available | Negative | 4192574 - 4192804 | 8931.15 |
| sodium-potassium/proton antiporter chaa | C9182_20770 | Not Available | Positive | 4193074 - 4194174 | 39166.9 |
| type iv secretion protein rhs | C9182_20775 | Not Available | Negative | 4194491 - 4194587 | 3149.76 |
| 50s ribosomal protein l31 | C9182_20780 | Not Available | Negative | 4194747 - 4194959 | 7871.49 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





