Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transport atp-binding protein oppf | C9182_20630 | Not Available | Negative | 4160885 - 4161889 | 37197.8 |
| abc transporter atp-binding protein | C9182_20635 | Not Available | Negative | 4161886 - 4162899 | 37148.7 |
| peptide abc transporter permease | C9182_20640 | Not Available | Negative | 4162911 - 4163819 | 33005.9 |
| peptide abc transporter permease | C9182_20645 | Not Available | Negative | 4163834 - 4164754 | 33445.3 |
| oligopeptide abc transporter substrate-binding protein oppa | C9182_20650 | Not Available | Negative | 4164840 - 4166471 | 60979.1 |
| naat family transporter yche | C9182_20655 | Not Available | Negative | 4167209 - 4167856 | 23522.7 |
| bifunctional acetaldehyde-coa/alcohol dehydrogenase | C9182_20660 | Not Available | Positive | 4168333 - 4171008 | 96132.5 |
| thymidine kinase | C9182_20665 | Not Available | Negative | 4171310 - 4171927 | 23399.9 |
| dna-binding protein h-ns | C9182_20670 | Not Available | Positive | 4172532 - 4172945 | 15540.5 |
| utp--glucose-1-phosphate uridylyltransferase | C9182_20675 | Not Available | Negative | 4173089 - 4173997 | 32944.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





