Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase a | C9182_19935 | Not Available | Negative | 4033696 - 4034517 | 30422.0 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | C9182_19940 | Not Available | Negative | 4034514 - 4035503 | 35212.9 |
| chaperone sura | C9182_19945 | Not Available | Negative | 4035503 - 4036789 | 47286.5 |
| lps-assembly protein lptd | C9182_19950 | Not Available | Negative | 4036842 - 4039196 | 89675.8 |
| co-chaperone djla | C9182_19955 | Not Available | Positive | 4039451 - 4040266 | 30567.2 |
| pp_03931 | C9182_19960 | Not Available | Negative | 4040601 - 4041581 | Not Available |
| antitoxin cptb | C9182_19965 | Not Available | Positive | 4041824 - 4042090 | 10547.7 |
| toxin cpta | C9182_19970 | Not Available | Positive | 4042071 - 4042478 | 16065.0 |
| flavodoxin-2 | C9182_19975 | Not Available | Negative | 4042518 - 4043039 | 19701.2 |
| tyrosine recombinase xerd | C9182_19980 | Not Available | Positive | 4043151 - 4044047 | 34248.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





