Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein csid | C9182_19120 | Not Available | Positive | 3876818 - 3877795 | 37377.6 |
| l-2-hydroxyglutarate oxidase | C9182_19125 | Not Available | Positive | 3877815 - 3879083 | 46056.8 |
| nadp-dependent succinate-semialdehyde dehydrogenase i | C9182_19130 | Not Available | Positive | 3879106 - 3880554 | 51808.1 |
| 4-aminobutyrate--2-oxoglutarate transaminase | C9182_19135 | Not Available | Positive | 3880568 - 3881848 | 45689.3 |
| gaba permease | C9182_19140 | Not Available | Positive | 3882159 - 3883559 | 51097.1 |
| transcriptional regulator | C9182_19145 | Not Available | Positive | 3883580 - 3884242 | 24992.3 |
| peptidoglycan-binding protein lysm | C9182_19150 | Not Available | Negative | 3884243 - 3884692 | 16036.9 |
| yqae/pmp3 family membrane protein | C9182_19155 | Not Available | Negative | 3884776 - 3884934 | 5865.57 |
| transcriptional regulator | C9182_19160 | Not Available | Positive | 3885117 - 3885416 | 10596.9 |
| thiosulfate sulfurtransferase ygap | C9182_19165 | Not Available | Positive | 3885426 - 3885950 | 18701.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





