Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative selenium delivery protein ydfz | C9182_18595 | Not Available | Negative | 3762171 - 3762374 | 7276.83 |
| transcriptional regulator | C9182_18600 | Not Available | Negative | 3762552 - 3763238 | 26566.7 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | C9182_18605 | Not Available | Negative | 3763327 - 3764073 | 27250.5 |
| peptidyl-dipeptidase dcp | C9182_18610 | Not Available | Positive | 3764210 - 3766255 | 77491.7 |
| 2-oxo-tetronate isomerase | C9182_18615 | Not Available | Negative | 3766300 - 3766818 | 18280.8 |
| ydei family stress tolerance ob fold protein | C9182_18620 | Not Available | Positive | 3767094 - 3767486 | 14134.9 |
| sensor domain-containing diguanylate cyclase | C9182_18625 | Not Available | Positive | 3767741 - 3768631 | 33881.4 |
| protein mgts | C9182_18630 | Not Available | Negative | 3768850 - 3768945 | 3509.36 |
| efflux mfs transporter ydee | C9182_18635 | Not Available | Negative | 3769072 - 3770259 | 42585.4 |
| o-acetylserine/cysteine exporter | C9182_18640 | Not Available | Positive | 3770454 - 3771353 | 32349.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





