Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain FWSEC0407 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323480 bp
Thymine Count
1323151 bp
Guanine Count
1343978 bp
Cytosine Count
1355931 bp
Genome Length
5356205 bp
Protein-coding Genes
4784 genes
Non-Coding Genes
444 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate--pyruvate aminotransferase alac | C9182_18340 | Not Available | Positive | 3707100 - 3708338 | 46218.8 |
| membrane protein ypdk | C9182_18345 | Not Available | Negative | 3708403 - 3708474 | 2704.57 |
| lipid a biosynthesis palmitoleoyltransferase | C9182_18350 | Not Available | Negative | 3708830 - 3709750 | 35495.5 |
| duf2545 family protein | C9182_18355 | Not Available | Positive | 3710103 - 3710345 | 8923.5 |
| hypothetical protein | C9182_18360 | Not Available | Negative | 3710422 - 3710697 | 10180.5 |
| yfdx family protein | C9182_18365 | Not Available | Positive | 3711031 - 3711663 | 22907.4 |
| formyl-coa--oxalate coa-transferase | C9182_18370 | Not Available | Positive | 3712176 - 3713426 | 45830.7 |
| oxalyl-coa decarboxylase | C9182_18375 | Not Available | Positive | 3713480 - 3715174 | 60614.9 |
| transporter yfdv | C9182_18380 | Not Available | Positive | 3715244 - 3716188 | 33644.9 |
| acetyl-coa--oxalate coa-transferase | C9182_18385 | Not Available | Positive | 3716262 - 3717407 | 41673.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





